I just saw your reply to my menu questions. Not sure how I missed it previously.
Couple of things:
Once you change a custom menu bank, it is changed and saved. I think that is a major flaw in that you can't make temporary changes and then revert back to your standard settings. To my knowledge, I believe the only way you get back to your personal settings is to save them on a card and reload them. That's a pain.
Regarding Lightroom, I think I may not have been clear. What I was saying is that when you shoot in raw, virtually all of the camera settings (other than exposure and white balance) are not read by Lightroom. I understand this and use the special profiles that Adobe developed or some special ones that I did to cope with that situation. Capture NX will read the camera settings in raw and thus does give you a closer raw image to what you had set in the camera. Lightroom has so many other features that it makes my image processing and filing so much easier.