Inquired about my D3 body to Nikon. Heard back yesterday:
The camera you specified has not been in service before.
There is no way to accurately tell the total number of times your camera shutter has released. While there are third party software applications designed to read a cameras shutter count, this number is not always accurate because the shutter release times may be reset by firmware updates, or reset in the Service department if certain parts are replaced or other operations are performed.
So...maybe firmware update? I am happy with the camera and will just have to quit worrying about the shutter count.